SubtiBank SubtiBank
ydfC [2019-08-28 10:07:42]
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ydfC [2019-08-28 10:07:42]

unknown
locus
BSU_05360
pI
9.86
mw
33.41 kDa
protein length
306 aa Sequence Blast
gene length
921 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]
  • [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

    • Gene

    Coordinates
    582,536 → 583,456

    The protein

    Protein family

  • [SW|EamA transporter family] (according to UniProt)

    • [SW|Domains]

  • [SW|EamA domain] 1 (aa 17-140) (according to UniProt)
  • [SW|EamA domain] 2 (aa 160-285) (according to UniProt)

    • [SW|Localization]

  • cell membrane (according to UniProt)

    • Biological materials

    Mutant

  • MGNA-C143 (ydfC::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2141 NBRP B. subtilis, Japan]
  • BKE05360 (Δ[gene|DB6054A37D2EC1C1961C49825AF74171FADF1A3B|ydfC]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE05360 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTCCTCTCACTCCTCTTT, downstream forward: _UP4_TAAAACAAAAAAGATACCAA
  • BKK05360 (Δ[gene|DB6054A37D2EC1C1961C49825AF74171FADF1A3B|ydfC]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK05360 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTCCTCTCACTCCTCTTT, downstream forward: _UP4_TAAAACAAAAAAGATACCAA